How To Cite Cancer Cell Line Encyclopedia

From the proteomics community there was interest about how we normalized the data as the.

How to cite cancer cell line encyclopedia. Ccle cancer cell line encyclopedia cclf cancer cell line factory drug repurposing hub prism. If you are interested in identifying cancer vulnerabilities in your favorite models please consider sharing them and allowing us to generate data which will be available to the entire community. The ccle cancer cell line encyclopedia project is a collaboration between the broad institute and the novartis institutes for biomedical research and its genomics institute of the novartis research foundation to conduct a detailed genetic and pharmacologic characterization of a large panel of human cancer models to develop integrated computational analyses that link distinct pharmacologic vulnerabilities to genomic patterns and to translate cell line integrative genomics into cancer. Click the info icon next to the project title.

6th jul 2017. 2012 the cancer cell line encyclopedia enables predictive modelling of anticancer drug sensitivity. In the bottom right part of the project information box click copy project. I am looking for databases that has the rna seq data for different cancer cell lines and control.

Citation s barretina j et al. How to use cancer cell line encyclopedia. 2020 the broad institute of mit harvard. Project information box is displayed.

Access the ccle public project by selecting cancer cell line encyclopedia ccle from public projects in the top navigation bar. Mass spectrometry based proteomics data is broadly unfamiliar to most biologists in our experience resulting in questions from analysts about how to use the data. The cancer cell line encyclopedia is a database of gene expression genotype and drug sensitivity data for human cancer cell lines. We recently reported the quantitative proteomics of 375 samples as part of the cancer cell line encyclopedia nusinow et al 2020 1.

The cancer cell line encyclopedia project is a collaboration between the broad institute and the novartis institutes for biomedical research and its genomics institute of the novartis research foundation to conduct a detailed genetic and pharmacologic characterization of a large panel of human cancer models to develop integrated computational analyses that link distinct pharmacologic. Please see below for a partial list of resources or refer to the list of cancer related data software and tools.